rpms/R-maanova/devel R-maanova.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2

[Pierre-YvesChibon (pingou)]

Author: pingou

Update of /cvs/pkgs/rpms/R-maanova/devel
In directory cvs-int.fedora.redhat.com:/tmp/cvs-serv20230/devel

Modified Files:
	.cvsignore sources 
Added Files:
	R-maanova.spec 
Log Message:



--- NEW FILE R-maanova.spec ---
%define packname  maanova

Name:             R-%{packname}
Version:          1.9.0 
Release:          1%{?dist}
Summary:          Analysis of N-dye Micro Array using mixed model effect
Summary(fr):      Analise de puce à ADN à N marqueurs par different modèle

Group:            Applications/Productivity
License:          GPLv2+ 
URL:              http://www.bioconductor.org/packages/2.1/bioc/html/maanova.html
Source0:          http://www.bioconductor.org/packages/2.2/bioc/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)

Requires:         R-qvalue
Requires(post):   R
Requires(postun): R
BuildRequires:    R >= 2.3.0 tetex-latex R-qvalue R-devel

%description
Analysis of N-dye Micro Array experiment using mixed model effect
Containing analysis of variance, permutation and bootstrap, cluster 
and consensus tree

%description -l fr
Analise de puce à ADN par l'utilisation de différent modèle.
Contient une analise de variance, par permutation et par substitution,
permet de faire d'estimer cluster et arbre relationnel

%prep
%setup -c -q -n %{packname}

%build

%install
%{__rm} -rf %{buildroot}

chmod -x %{packname}/inst/*.txt
chmod -x %{packname}/src/*.c
%{__sed} -i -e 's/\r$//'  %{packname}/DESCRIPTION
%{__sed} -i -e 's/\r$//'  %{packname}/inst/doc/abf1.tex


mkdir -p %{buildroot}%{_libdir}/R/library ; R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library

# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
%{__rm} -rf %{buildroot}%{_libdir}/R/library/R.css

chmod -x %{buildroot}%{_libdir}/R/library/maanova/TODO.txt
chmod -x %{buildroot}%{_libdir}/R/library/maanova/STATUS.txt
chmod -x %{buildroot}%{_libdir}/R/library/maanova/README.txt
chmod -x %{buildroot}%{_libdir}/R/library/maanova/LICENSE.txt
chmod -x %{buildroot}%{_libdir}/R/library/maanova/doc/maanova.Rnw

%check
%{_bindir}/R CMD check %{packname}

%clean
%{__rm} -rf %{buildroot}

%post 
%{_R_make_search_index}

%postun 
%{_R_make_search_index}

%files
%defattr(-, root, root, -)
%dir %{_libdir}/R/library/%{packname}
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/README.txt
%{_libdir}/R/library/%{packname}/TODO.txt
%{_libdir}/R/library/%{packname}/STATUS.txt
%{_libdir}/R/library/%{packname}/LICENSE.txt
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/libs
%{_libdir}/R/library/%{packname}/demo
%{_libdir}/R/library/%{packname}/data
%{_libdir}/R/library/%{packname}/R
%{_libdir}/R/library/%{packname}/R-ex
%{_libdir}/R/library/%{packname}/help
%doc %{_libdir}/R/library/%{packname}/latex
%doc %{_libdir}/R/library/%{packname}/doc
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/man


%changelog
* Wed Jan 16 2008 Pingou <pingoufc4 at yahoo.fr> 1.9.0-1
- Update to version 1.9.0

* Sat Jan 05 2008 Pingou <pingoufc4 at yahoo.fr> 1.8.0-1
- Update to bioconductor 2.1 and maanova 1.8.0

* Sun Aug 03 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-3
- Add the post and post(un) section

* Tue Jul 10 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-2
- Change on the %%post and %%postun to fit the packaging guidelines
- Change on the %%prep section to fit the guidelines

* Mon Jun 24 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-1
- Change in %%doc to avoid redundancy

*Wed May 23 2007 pingou <pingoufc4 at yahoo.fr> 1.4.0-0.7
- Add the %%check section

*Sun May 06 2007 pingou <pingoufc4 at yahoo.fr> 1.4.0-0.6
- Remove previously exclude condition

*Sun Apr 22 2007 pingou <pingoufc4 at yahoo.fr> 1.4.0-0.5
- Correction in the licence (GPLv2) and in the BR>=2.3.0

*Wed Apr 18 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-0.4
- Changes on the install to set the correct right to the files (ch mod)

*Wed Apr 18 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-0.3
- Add of the french translation

*Wed Apr 18 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-0.2
- Change in prep, install clean 
- add of post postun

*Wed Apr 18 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.0-0.1
- Build of the rpm


Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-maanova/devel/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- .cvsignore	17 Jan 2008 17:07:38 -0000	1.1
+++ .cvsignore	19 Jan 2008 18:56:15 -0000	1.2
@@ -0,0 +1 @@
+maanova_1.9.0.tar.gz


Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-maanova/devel/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- sources	17 Jan 2008 17:07:38 -0000	1.1
+++ sources	19 Jan 2008 18:56:15 -0000	1.2
@@ -0,0 +1 @@
+2a940b10b5140c72ad24a4db9c63289e  maanova_1.9.0.tar.gz