rpms/R-affyio/F-7 R-affyio.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2

[Pierre-YvesChibon (pingou)]

Author: pingou

Update of /cvs/pkgs/rpms/R-affyio/F-7
In directory cvs-int.fedora.redhat.com:/tmp/cvs-serv28120/F-7

Modified Files:
	.cvsignore sources 
Added Files:
	R-affyio.spec 
Log Message:



--- NEW FILE R-affyio.spec ---
%define packname  affyio

Name:             R-%{packname}
Version:          1.6.1 
Release:          1%{?dist}
Summary:          Tools for parsing Affymetrix data files
Summary(fr):      Outils d'analyse de fichier de données de puces affymetrix

Group:            Applications/Engineering
License:          LGPLv2+
URL:              http://bioconductor.org/packages/2.1/bioc/html/%{packname}.html
Source0:          http://bioconductor.org/packages/2.1/bioc/src/contrib/%{packname}_%{version}.tar.gz 
BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)

Requires(post):   R
Requires(postun): R
BuildRequires:    R-devel tetex-latex zlib-devel

%description
Routines for parsing Affymetrix data files based upon file format 
information. Primary focus is on accessing the CEL and CDF file formats.

%description -l fr
Scripts pour analyser les fichiers de données issuent de puces affymetrix
basé sur les informations fournis pas les extensions. Un des premier 
objectifs est de convertir les données dans des fichiers au format
CEL ou CDF.

%prep
%setup -q -c -n %{packname}

%build

%install
rm -rf %{buildroot}

mkdir -p %{buildroot}%{_libdir}/R/library 
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css


%check
%{_bindir}/R CMD check %{packname}

%clean
rm -rf %{buildroot}

%post
%{_R_make_search_index}

%postun
%{_R_make_search_index}

%files
%defattr(-, root, root, -)
%dir %{_libdir}/R/library/%{packname}
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/man/
%doc %{_libdir}/R/library/%{packname}/latex/
%doc %{_libdir}/R/library/%{packname}/LICENSE
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/R/
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/help
%{_libdir}/R/library/%{packname}/libs/affyio.so

%changelog
* Mon Oct 08 2007 Pingou <pingoufc4 at yahoo.fr> 1.6.1-1
- Update to bioconductor 2.1 

* Wed Aug 29 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.1-2
- Change in the license tag to fit the guide lines
* Mon Jul 02 2007 Pingou <pingoufc4 at yahoo.fr> 1.4.1-1
- initial package for Fedora



Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-affyio/F-7/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- .cvsignore	19 Jan 2008 18:25:28 -0000	1.1
+++ .cvsignore	19 Jan 2008 19:07:08 -0000	1.2
@@ -0,0 +1 @@
+affyio_1.6.1.tar.gz


Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-affyio/F-7/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- sources	19 Jan 2008 18:25:28 -0000	1.1
+++ sources	19 Jan 2008 19:07:08 -0000	1.2
@@ -0,0 +1 @@
+0d11eb216f4b735cb3fd796195e49309  affyio_1.6.1.tar.gz