rpms/R-BSgenome.Celegans.UCSC.ce2/F-11 R-BSgenome.Celegans.UCSC.ce2.spec, NONE, 1.1
pingou
pingou at fedoraproject.org
Wed Sep 2 20:37:02 UTC 2009
Author: pingou
Update of /cvs/pkgs/rpms/R-BSgenome.Celegans.UCSC.ce2/F-11
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv5928
Added Files:
R-BSgenome.Celegans.UCSC.ce2.spec
Log Message:
Add file + Increase release
--- NEW FILE R-BSgenome.Celegans.UCSC.ce2.spec ---
%global packname BSgenome.Celegans.UCSC.ce2
%global bioc 2.4
Name: R-%{packname}
Version: 1.3.13
Release: 4%{?dist}
Summary: Caenorhabditis elegans genome (UCSC Release ce2)
Summary(fr): Genome de Caenorhabditis elegans (UCSC Release ce2)
Group: Applications/Engineering
License: Artistic 2.0
URL: http://www.bioconductor.org/packages/%{bioc}/data/annotation/html/%{packname}.html
Source0: http://www.bioconductor.org/packages/%{bioc}/data/annotation/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
Requires: R R-BSgenome
Requires(post): R
Requires(postun): R
BuildRequires: R-devel tetex-latex R-BSgenome
%description
Caenorhabditis elegans genome grabbed from UCSC (ce2, Mar. 2004)
and stored in Biostrings objects
%description -l fr
Genome de Caenorhabditis elegans extrait par UCSC (ce2, Mar. 2004)
et stocké dans un objet Biostrings
%prep
%setup -q -c -n %{packname}
%build
%install
rm -rf %{buildroot}
mkdir -p %{buildroot}%{_datadir}/R/library
R CMD INSTALL %{packname} -l %{buildroot}%{_datadir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_datadir}/R/library/R.css
%check
#this section refered to Biostrings which refer to this package
#%{_bindir}/R CMD check %{packname}
%clean
rm -rf %{buildroot}
%post
%{_R_make_search_index}
%postun
%{_R_make_search_index}
%files
%defattr(-, root, root, -)
%{_datadir}/R/library/%{packname}/CONTENTS
%{_datadir}/R/library/%{packname}/INDEX
%{_datadir}/R/library/%{packname}/NAMESPACE
%{_datadir}/R/library/%{packname}/extdata
%{_datadir}/R/library/%{packname}/Meta
%{_datadir}/R/library/%{packname}/help
%{_datadir}/R/library/%{packname}/R
%{_datadir}/R/library/%{packname}/R-ex
#noarch
%dir %{_datadir}/R/library/%{packname}
%doc %{_datadir}/R/library/%{packname}/latex
%doc %{_datadir}/R/library/%{packname}/html
%doc %{_datadir}/R/library/%{packname}/DESCRIPTION
%doc %{_datadir}/R/library/%{packname}/man
%changelog
* Wed Sep 02 2009 pingou <pingou at pingoured.fr> 1.3.13-4
- Increase release tag
* Wed Sep 02 2009 pingou <pingou at pingoured.fr> 1.3.13-3
- Re-add the dist tag cf https://fedorahosted.org/rel-eng/ticket/2152
* Fri Jul 31 2009 pingou <pingou at pingoured.fr> 1.3.13-2
- Increase release tag
* Fri Jul 31 2009 pingou <pingou at pingoured.fr> 1.3.13-1
- Update license tag
- Use global instead of define
- Update the R and BR (add R-BSgenome)
- Finally update the package
* Sat Jan 05 2008 Pingou <pingoufc4 at yahoo.fr> 1.2.0-5
- Remove the distro specific build of this package
* Fri Nov 23 2007 Pingou <pingoufc4 at yahoo.fr> 1.2.0-4
- Correction on the dependancies
* Thu Sep 20 2007 Pingou <pingoufc4 at yahoo.fr> 1.2.0-3
- Changes in the requires
* Wed Aug 29 2007 Pingou <pingoufc4 at yahoo.fr> 1.2.0-2
-Change the license tag
* Mon Jul 16 2007 Pingou <pingoufc4 at yahoo.fr> 1.2.0-1
- initial package for Fedora
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