FC5 breaks Accelrys InsightII - details
Jack Howarth
howarth at bromo.msbb.uc.edu
Fri Apr 7 16:31:26 UTC 2006
Jakub,
Thanks for the reply. I did an inventory of all the
executables and shared libraries in InsightII and 90%+
are fine with linkages to only __errno_location@@GLIBC_2.0.
Only three shared libraries...
libcblib.so
libdecipher_uif.so
libpgthread.so
and one executable, density, show symbols to errno. Interestingly
the shared libs show...
U _errno@@GLIBC_2.0
U errno@@GLIBC_2.0
...whereas the density binary shows...
086f5f1c B errno
086f5f1c V _errno
0805959c W __errno_location
The respective linkages are...
ldd libcblib.so
linux-gate.so.1 => (0x007c0000)
libstdc++-libc6.2-2.so.3 => /usr/lib/libstdc++-libc6.2-2.so.3 (0x00c4c000)
libm.so.6 => /lib/libm.so.6 (0x0045b000)
libc.so.6 => /lib/libc.so.6 (0x00dca000)
libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x008fc000)
/lib/ld-linux.so.2 (0x007c1000)
ldd libdecipher_uif.so
linux-gate.so.1 => (0x007c0000)
libstdc++-libc6.2-2.so.3 => /usr/lib/libstdc++-libc6.2-2.so.3 (0x003e6000)
libm.so.6 => /lib/libm.so.6 (0x00e90000)
libc.so.6 => /lib/libc.so.6 (0x005be000)
libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00111000)
/lib/ld-linux.so.2 (0x007c1000)
ldd libpgthread.so
/usr/bin/ldd: libpgthread.so: /usr/local/lib/ld-linux.so.2: bad ELF interpreter: No such file or directory
Interestingly for all the shared libs other than libpgthread.so, 'file *' shows...
ELF 32-bit LSB shared object, Intel 80386, version 1 (SYSV), not stripped
but libpgthread.so shows...
ELF 32-bit LSB shared object, Intel 80386, version 1 (SYSV), for GNU/Linux 2.0.0, not stripped
Should I take this to imply that the problem may be actually from the ancient libpgthread.so?
Jack
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