[Bug 481544] Review Request: perl-Bio-Graphics - Generate GD images of Bio::Seq objects

Mon Jan 26 11:18:35 UTC 2009

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https://bugzilla.redhat.com/show_bug.cgi?id=481544

Parag AN(पराग) <panemade at gmail.com> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
               Flag|fedora-review?              |fedora-review+

--- Comment #2 from Parag AN(पराग) <panemade at gmail.com>  2009-01-26 06:18:34 EDT ---
Review:
+ package builds in mock (rawhide i386).
koji build -> http://koji.fedoraproject.org/koji/taskinfo?taskID=1082184
+ rpmlint is silent for SRPM and for RPM.
+ source files match upstream url
1c1de50c9261b3e6a1b20e2f38701aa7  Bio-Graphics-1.83.tar.gz
+ package meets naming and packaging guidelines.
+ specfile is properly named, is cleanly written
+ Spec file is written in American English.
+ Spec file is legible.
+ dist tag is present.
+ build root is correct.
+ license is open source-compatible.
+ License text is included in package.
+ %doc is present.
+ BuildRequires are proper.
+ %clean is present.
+ package installed properly.
+ Macro use appears rather consistent.
+ Package contains code, not content.
+ no headers or static libraries.
+ no .pc file present.
+ no -devel subpackage
+ no .la files.
+ no translations are available
+ Does owns the directories it creates.
+ no scriptlets present.
+ no duplicates in %files.
+ file permissions are appropriate.
+ make test outputs
All tests successful.
Files=1, Tests=49,  1 wallclock secs ( 0.02 usr  0.00 sys +  0.55 cusr  0.05
csys =  0.62 CPU)
+ Package  perl-Bio-Graphics-1.83-2.fc11->
Provides: perl(Bio::Graphics) = 1.83 perl(Bio::Graphics::ConfiguratorI)
perl(Bio::Graphics::DrawTransmembrane) perl(Bio::Graphics::Feature)
perl(Bio::Graphics::FeatureBase) perl(Bio::Graphics::FeatureFile)
perl(Bio::Graphics::FeatureFile::Iterator) perl(Bio::Graphics::Glyph)
perl(Bio::Graphics::Glyph::Factory) perl(Bio::Graphics::Glyph::alignment)
perl(Bio::Graphics::Glyph::anchored_arrow) perl(Bio::Graphics::Glyph::arrow)
perl(Bio::Graphics::Glyph::box) perl(Bio::Graphics::Glyph::broken_line)
perl(Bio::Graphics::Glyph::cds) perl(Bio::Graphics::Glyph::christmas_arrow)
perl(Bio::Graphics::Glyph::crossbox) perl(Bio::Graphics::Glyph::dashed_line)
perl(Bio::Graphics::Glyph::diamond)
 perl(Bio::Graphics::Glyph::dna) perl(Bio::Graphics::Glyph::dot)
perl(Bio::Graphics::Glyph::dumbbell) perl(Bio::Graphics::Glyph::ellipse)
perl(Bio::Graphics::Glyph::ex) perl(Bio::Graphics::Glyph::extending_arrow)
perl(Bio::Graphics::Glyph::fixedwidth) perl(Bio::Graphics::Glyph::flag)
perl(Bio::Graphics::Glyph::gene) perl(Bio::Graphics::Glyph::generic)
perl(Bio::Graphics::Glyph::graded_segments) perl(Bio::Graphics::Glyph::group)
perl(Bio::Graphics::Glyph::heat_map)
perl(Bio::Graphics::Glyph::heat_map_ideogram)
perl(Bio::Graphics::Glyph::heterogeneous_segments)
perl(Bio::Graphics::Glyph::ideogram) perl(Bio::Graphics::Glyph::image)
perl(Bio::Graphics::Glyph::lightning) perl(Bio::Graphics::Glyph::line)
perl(Bio::Graphics::Glyph::merge_parts)
perl(Bio::Graphics::Glyph::merged_alignment) perl(Bio::Graphics::Glyph::minmax)
perl(Bio::Graphics::Glyph::oval) perl(Bio::Graphics::Glyph::pentagram)
perl(Bio::Graphics::Glyph::phylo_align) perl(Bio::Graphics::Glyph::pinsertion)
perl(Bio::Graphics::Glyph::primers)
perl(Bio::Graphics::Glyph::processed_transcript)
perl(Bio::Graphics::Glyph::protein) perl(Bio::Graphics::Glyph::ragged_ends)
perl(Bio::Graphics::Glyph::redgreen_box)
perl(Bio::Graphics::Glyph::redgreen_segment)
perl(Bio::Graphics::Glyph::repeating_shape) perl(Bio::Graphics::Glyph::rndrect)
perl(Bio::Graphics::Glyph::ruler_arrow) perl(Bio::Graphics::Glyph::saw_teeth)
perl(Bio::Graphics::Glyph::segmented_keyglyph)
perl(Bio::Graphics::Glyph::segments) perl(Bio::Graphics::Glyph::smoothing)
perl(Bio::Graphics::Glyph::so_transcript) perl(Bio::Graphics::Glyph::span)
perl(Bio::Graphics::Glyph::spectrogram) perl(Bio::Graphics::Glyph::splice_site)
perl(Bio::Graphics::Glyph::stackedplot)
perl(Bio::Graphics::Glyph::ternary_plot)
perl(Bio::Graphics::Glyph::text_in_box)
perl(Bio::Graphics::Glyph::three_letters)
perl(Bio::Graphics::Glyph::tic_tac_toe) perl(Bio::Graphics::Glyph::toomany)
perl(Bio::Graphics::Glyph::trace) perl(Bio::Graphics::Glyph::track)
perl(Bio::Graphics::Glyph::transcript) perl(Bio::Graphics::Glyph::transcript2)
perl(Bio::Graphics::Glyph::translation) perl(Bio::Graphics::Glyph::triangle)
perl(Bio::Graphics::Glyph::two_bolts) perl(Bio::Graphics::Glyph::wave)
perl(Bio::Graphics::Glyph::weighted_arrow)
perl(Bio::Graphics::Glyph::whiskerplot) perl(Bio::Graphics::Glyph::wiggle_box)
perl(Bio::Graphics::Glyph::wiggle_density)
perl(Bio::Graphics::Glyph::wiggle_xyplot) perl(Bio::Graphics::Glyph::xyplot)
perl(Bio::Graphics::Panel) perl(Bio::Graphics::Pictogram)
perl(Bio::Graphics::RendererI) perl(Bio::Graphics::Util)
perl(Bio::Graphics::Wiggle) perl(Bio::Graphics::Wiggle::Loader)

Requires: /usr/bin/perl perl(Bio::AlignIO) perl(Bio::Assembly::IO)
perl(Bio::Coordinate::Pair) perl(Bio::DB::GFF::Util::Rearrange)
perl(Bio::DB::SeqFeature::Store) perl(Bio::Graphics)
perl(Bio::Graphics::Browser::Util) perl(Bio::Graphics::Feature)
perl(Bio::Graphics::FeatureFile) perl(Bio::Graphics::Glyph::Factory)
perl(Bio::Graphics::Glyph::generic) perl(Bio::Graphics::Glyph::minmax)
perl(Bio::Graphics::Glyph::segments) perl(Bio::Graphics::Glyph::xyplot)
perl(Bio::Graphics::Panel) perl(Bio::Graphics::Util)
perl(Bio::Graphics::Wiggle) perl(Bio::Location::Simple)
perl(Bio::Root::Version) perl(Bio::SCF) perl(Bio::SearchIO)
perl(Bio::SeqFeature::Generic) perl(Bio::SeqIO) perl(Bio::Tools::CodonTable)
perl(Bio::Tools::GuessSeqFormat) perl(Bio::TreeIO) perl(CGI) perl(CGI::Carp)
perl(Carp) perl(Cwd) perl(Data::Dumper) perl(Digest::MD5) perl(Dumpvalue)
perl(Exporter) perl(File::Basename) perl(File::Path) perl(File::Spec)
perl(File::Temp) perl(File::stat) perl(GD) perl(GD::Simple) perl(Getopt::Long)
perl(IO::File) perl(IO::Seekable) perl(List::Util) perl(Math::Trig)
perl(Memoize) perl(POSIX) perl(SVG) >= 2.26 perl(Statistics::Descriptive)
perl(Text::ParseWords) perl(base) perl(constant) perl(lib) perl(strict)
perl(vars) perl(warnings)

APPROVED.

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