rpms/perl-bioperl-run/devel .cvsignore, 1.2, 1.3 perl-bioperl-run.spec, 1.2, 1.3 sources, 1.2, 1.3

[Alex Lancaster]

Author: alexlan

Update of /cvs/extras/rpms/perl-bioperl-run/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv7983

Modified Files:
	.cvsignore perl-bioperl-run.spec sources 
Log Message:
- Update to release candidate 1 for 1.6.0 
- Remove examples subdirectory, no longer distributed
- Deprecated modules no longer need removing
- Add BR: perl(IPC::Run)



Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/.cvsignore,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- .cvsignore	19 Apr 2007 21:50:37 -0000	1.2
+++ .cvsignore	3 Feb 2009 14:15:11 -0000	1.3
@@ -1 +0,0 @@
-bioperl-run-1.5.2_100.tar.bz2


Index: perl-bioperl-run.spec
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/perl-bioperl-run.spec,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- perl-bioperl-run.spec	4 Mar 2008 05:40:28 -0000	1.2
+++ perl-bioperl-run.spec	3 Feb 2009 14:15:11 -0000	1.3
@@ -1,18 +1,19 @@
 Name:           perl-bioperl-run
-Version:        1.5.2_100
-Release:        3%{?dist}
+Version:        1.5.9
+Release:        0.1.1%{?dist}
 Summary:        Modules to provide a Perl interface to various bioinformatics applications
 
 Group:          Development/Libraries
 License:        GPL+ or Artistic
 URL:            http://bioperl.org
-Source0:        http://bioperl.org/DIST/bioperl-run-%{version}.tar.bz2
+Source0:        http://bioperl.org/DIST/BioPerl-run-%{version}_1.tar.bz2
 BuildRoot:      %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
 
 BuildArch:      noarch
-BuildRequires:  perl(Bio::Root::Version) >= 1.5.2
+BuildRequires:  perl(Bio::Root::Version) >= 1.5.9
 BuildRequires:  perl(Algorithm::Diff) >= 1
 BuildRequires:  perl(XML::Parser::PerlSAX)
+BuildRequires:  perl(IPC::Run)
 BuildRequires:  perl(HTML::Parser)
 BuildRequires:  perl(Module::Build)
 Requires:  perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
@@ -23,19 +24,13 @@
 used with common Bioperl objects.
 
 %prep
-%setup -q -n bioperl-run-%{version}
+%setup -q -n BioPerl-run-%{version}._1
 
 # remove all execute bits from the doc stuff
-find examples -type f -exec chmod -x {} 2>/dev/null ';'
 chmod -x INSTALL INSTALL.PROGRAMS
 
-# remove deprecated modules (reported upstream and will be removed in
-# _101 tarball)
-rm Bio/Tools/Run/Phylo/Forester/SDI.pm Bio/Tools/Run/JavaRunner.pm Bio/Tools/Run/AbstractRunner.pm
-
 %build
 %{__perl} Build.PL --installdirs vendor << EOF
-n
 a
 EOF
 
@@ -62,7 +57,6 @@
 %files
 %defattr(-,root,root,-)
 ## don't distribute "doc" "scripts" subdirectories, they don't contain docs
-%doc examples
 %doc AUTHORS Changes INSTALL INSTALL.PROGRAMS README
 %{perl_vendorlib}/*
 %{_mandir}/man3/*.3*    
@@ -70,6 +64,12 @@
 %{_mandir}/man1/*.1*
 
 %changelog
+* Tue Feb  3 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.5.9-0.1.1
+- Update to release candidate 1 for 1.6.0 
+- Remove examples subdirectory, no longer distributed
+- Deprecated modules no longer need removing
+- Add BR: perl(IPC::Run)
+
 * Tue Mar  4 2008 Tom "spot" Callaway <tcallawa at redhat.com> 1.5.2_100-3
 - rebuild for new perl
 


Index: sources
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/sources,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- sources	19 Apr 2007 21:50:37 -0000	1.2
+++ sources	3 Feb 2009 14:15:11 -0000	1.3
@@ -1 +0,0 @@
-cc44c719820608f92139f4a81d472ea6  bioperl-run-1.5.2_100.tar.bz2