Fedora 9 updates-testing report

updates at fedoraproject.org updates at fedoraproject.org
Sat May 2 16:43:25 UTC 2009 

The following builds have been pushed to Fedora 9 updates-testing

    PyQwt-5.1.0-4.fc9
    R-Biobase-2.4.0-2.fc9
    R-BufferedMatrix-1.8.0-1.fc9
    R-DynDoc-1.22.0-1.fc9
    R-GeneR-2.14.0-2.fc9
    R-IRanges-1.2.0-2.fc9
    R-affyio-1.12.0-2.fc9
    R-multtest-2.0.0-1.fc9
    R-qvalue-1.18.0-1.fc9
    R-tkWidgets-1.22.0-1.fc9
    R-widgetTools-1.22.0-1.fc9
    clamav-0.93.3-3.fc9
    collectl-3.3.2-1.fc9
    etoys-4.0.2206-3.fc9
    gajim-0.12.1-3.fc9
    igraph-0.5.2-1.fc9
    incollector-1.0-7.fc9.1
    jnettop-0.13.0-5.fc9
    lxsession-lite-0.3.6-5.fc9
    merkaartor-0.13.2-2.fc9
    php-ezc-Cache-1.4-1.fc9
    php-ezc-Mail-1.6.1-3.fc9
    php-ezc-PersistentObject-1.5.1-1.fc9
    php-ezc-SystemInformation-1.0.7-1.fc9
    php-ezc-Template-1.3.2-1.fc9
    powwow-1.2.15-1.fc9
    samba-3.2.11-0.29.fc9
    slapi-nis-0.13-1.fc9
    squeak-image-3.10.2.7179-1.fc9
    squeak-vm-3.10.4-3.fc9
    testdisk-6.11-2.fc9

Details about builds:


================================================================================
 PyQwt-5.1.0-4.fc9 (FEDORA-2009-4112)
 Python bindings for Qwt
--------------------------------------------------------------------------------
Update Information:

Rebuild for new qwt. PyQwt is a set of Python bindings for the Qwt C++ class
library which extends the Qt framework with widgets for scientific and
engineering applications. It provides a widget to plot 2-dimensional data and
various widgets to display and control bounded or unbounded floating point
values.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #472229 - Review Request: PyQwt - Python bindings for Qwt
        https://bugzilla.redhat.com/show_bug.cgi?id=472229
--------------------------------------------------------------------------------


================================================================================
 R-Biobase-2.4.0-2.fc9 (FEDORA-2009-4147)
 Base functions for Bioconductor
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 2.4.0-1
- Update to Bioconductor 2.4 and R-2.9.0
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 2.2.2-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-BufferedMatrix-1.8.0-1.fc9 (FEDORA-2009-4147)
 A matrix data storage object method from bioconductor
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 1.8.0-1
- Update to Bioconductor 2.4 and R-2.9.0
--------------------------------------------------------------------------------


================================================================================
 R-DynDoc-1.22.0-1.fc9 (FEDORA-2009-4147)
 Functions for dynamic documents
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 1.22.0-1
- Update to Bioconductor 2.4 and R-2.9.0
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.20.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-GeneR-2.14.0-2.fc9 (FEDORA-2009-4147)
 R for genes and sequences analysis
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 2.14.0-2
- Does not apply the patch made for F-11
* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 2.14.0-1
- Update to Bioconductor 2.4 and R-2.9.0
* Tue Apr 21 2009 Milos Jakubicek <xjakub at fi.muni.cz> - 2.13.1-2
- Fix FTBFS: added R-GeneR-gcc44.patch.
- Do not override the release macro.
- Use %global instead of %define.
* Tue Mar 31 2009 pingou <pingou at pingoured.fr> - 2.13.1-1
- Update to 2.13.1 from the devel version of bioconductor
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 2.12.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-IRanges-1.2.0-2.fc9 (FEDORA-2009-4147)
 Low-level containers for storing sets of integer ranges
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Wed Apr 29 2009 pingou <pingou at pingoured.fr> 1.2.0-2
- Update the file section to package doc
- Update the Requires and BR to take into account R version
* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 1.2.0-1
- Update to Bioconductor 2.4 and R-2.9.0
--------------------------------------------------------------------------------


================================================================================
 R-affyio-1.12.0-2.fc9 (FEDORA-2009-4147)
 Tools for parsing Affymetrix data files
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Wed Apr 29 2009 pingou <pingou at pingoured.fr> - 1.12.0-2
- version 1.20.0 != 1.12.0
* Wed Apr 29 2009 pingou <pingou at pingoured.fr> - 1.12.0-1
- Update to Bioconductor 2.4 and R 2.9.0
- Add requires to R-methods
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.10.1-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-multtest-2.0.0-1.fc9 (FEDORA-2009-4147)
 Multiple hypothesis testing library from Bioconductor
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 2.0.0-1
- Update to Bioconductor 2.4 and R-2.9.0
- Use global instead of define
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.22.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-qvalue-1.18.0-1.fc9 (FEDORA-2009-4147)
 Q-value estimation for false discovery rate control
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Wed Apr 29 2009 pingou <pingou at pingoured.fr> - 1.18.0-1
- Update to Bioconductor 2.4 and R 2.9.0
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.16.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-tkWidgets-1.22.0-1.fc9 (FEDORA-2009-4147)
 Widgets to provide user interfaces from bioconductor
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 1.22.0-1
- Update to Bioconductor 2.4 and R-2.9.0
- Uses global instead of define
- Change the license from LGPLv2+ to Artistic 2.0
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.20.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-widgetTools-1.22.0-1.fc9 (FEDORA-2009-4147)
 Bioconductor tools to support tcltk widgets
--------------------------------------------------------------------------------
Update Information:

Update to Bioconductor 2.4
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 pingou <pingou at pingoured.fr> 1.22.0-1
- Update to Bioconductor 2.4 and R-2.9.0
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.18.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 clamav-0.93.3-3.fc9 (FEDORA-2009-4202)
 End-user tools for the Clam Antivirus scanner
--------------------------------------------------------------------------------
Update Information:

Here is where you give an explanation of your update.
--------------------------------------------------------------------------------
ChangeLog:

* Wed Apr 22 2009 Enrico Scholz <enrico.scholz at informatik.tu-chemnitz.de> - 0.93.3-3
- added -nooutdate patch to avoid the 'has connected too many times
  with an outdated version' on freshclam invocation. Because clamav is
  buggy like hell and full with security leaks, the database upgrade
  must not be skipped as broken modules are disabled by it too.

  The patch itself is probably required due to a bug in freshclam:
  this message should never be triggered when 'freshclam' is invoked
  in non-daemon mode (e.g. manually or as a cron-job).
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #496926 - Virus database not updated due to an outdated clamav version
        https://bugzilla.redhat.com/show_bug.cgi?id=496926
--------------------------------------------------------------------------------


================================================================================
 collectl-3.3.2-1.fc9 (FEDORA-2009-4179)
 A utility to collect various linux performance data
--------------------------------------------------------------------------------
Update Information:

- upgrade to upstream version 3.3.2 - changelog:
http://collectl.sourceforge.net/Releases.html
--------------------------------------------------------------------------------
ChangeLog:

* Wed Apr 29 2009 Dan Horák <dan[at]danny.cz> 3.3.2-1
- upgrade to upstream version 3.3.2
- install missing file
- changelog: http://collectl.sourceforge.net/Releases.html
* Tue Apr 28 2009 Dan Horák <dan[at]danny.cz> 3.3.1-1
- upgrade to upstream version 3.3.1
- changelog: http://collectl.sourceforge.net/Releases.html
--------------------------------------------------------------------------------


================================================================================
 etoys-4.0.2206-3.fc9 (FEDORA-2009-4091)
 A media-rich model, game, and simulation construction kit and authoring tool
--------------------------------------------------------------------------------


================================================================================
 gajim-0.12.1-3.fc9 (FEDORA-2009-4170)
 Jabber client written in PyGTK
--------------------------------------------------------------------------------
Update Information:

* Sat May 02 2009 Debarshi Ray <rishi at fedoraproject.org> - 0.12.1-3  - Added
'Requires: gnome-python2-bonobo'. (Red Hat Bugzilla #470181)
--------------------------------------------------------------------------------
ChangeLog:

* Sat May  2 2009 Debarshi Ray <rishi at fedoraproject.org> - 0.12.1-3
- Added 'Requires: gnome-python2-bonobo'. (Red Hat Bugzilla #470181)
* Tue Feb 24 2009 Release Engineering <rel-eng at fedoraproject.org> - 0.12.1-2
- Autorebuild for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #470181 - Missing dependency gnome-python2-bonobo
        https://bugzilla.redhat.com/show_bug.cgi?id=470181
--------------------------------------------------------------------------------


================================================================================
 igraph-0.5.2-1.fc9 (FEDORA-2009-4123)
 Library for creating and manipulating graphs
--------------------------------------------------------------------------------
Update Information:

see: http://igraph.sourceforge.net/relnotes-0.5.2.html
--------------------------------------------------------------------------------
ChangeLog:

* Mon Apr 27 2009 Neal Becker <ndbecker2 at gmail.com> - 0.5.2-1
- Update to 0.5.2
- Try not applying patch #3
* Thu Feb 26 2009 Neal Becker <ndbecker2 at gmail.com> - 0.5.1-6
- Make that 0.5.1-6
* Thu Feb 26 2009 Neal Becker <ndbecker2 at gmail.com> - 0.5.1-5
- Patch3 for gcc-4.4 (cstdio)
* Tue Feb 24 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.5.1-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
* Mon Dec 22 2008 Neal Becker <ndbecker2 at gmail.com> - 0.5.1-4
- Bump tag
--------------------------------------------------------------------------------


================================================================================
 incollector-1.0-7.fc9.1 (FEDORA-2009-4136)
 Information collector
--------------------------------------------------------------------------------
Update Information:

Added explicit Requires: mono-core (resolves BZ#469602).
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 Milos Jakubicek <xjakub at fi.muni.cz> - 1.0-7
- Added explicit R: mono-core (resolves BZ#469602).
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #469602 - dependencies don't pull in mono
        https://bugzilla.redhat.com/show_bug.cgi?id=469602
--------------------------------------------------------------------------------


================================================================================
 jnettop-0.13.0-5.fc9 (FEDORA-2009-4190)
 Network traffic tracker
--------------------------------------------------------------------------------
Update Information:

ncurses based network traffic tracker
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #490872 - Review Request: jnettop - Network traffic tracker
        https://bugzilla.redhat.com/show_bug.cgi?id=490872
--------------------------------------------------------------------------------


================================================================================
 lxsession-lite-0.3.6-5.fc9 (FEDORA-2009-4140)
 Lightweight X11 session manager
--------------------------------------------------------------------------------
Update Information:

This update enables user switching with gdm and fixes the icons in the logout
dialog.
--------------------------------------------------------------------------------
ChangeLog:

* Mon Apr 27 2009 Christoph Wickert <cwickert at fedoraproject.org> - 0.3.6-5
- Fix Session name (Andrew Lee)
* Mon Apr 27 2009 Christoph Wickert <cwickert at fedoraproject.org> - 0.3.6-4
- Support user switching also with newer gdm
- Add patch to fix icon search path (Marty Jack)
* Wed Feb 25 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.3.6-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 merkaartor-0.13.2-2.fc9 (FEDORA-2009-4168)
 Qt-Based OpenStreetMap editor
--------------------------------------------------------------------------------
Update Information:

Fix segfault when run under gnome / qgtkstyle Bugfix update that makes
merkaartor work a lot better with the now default 0.6 OSM api and includes a
bugfix for intel graphics    This should be the final update for F-9    The
following bugfixes are included:      * FIX : Graphical corruption on Intel
chipsets when "Show downloaded areas" was enabled    * FIX : API 0.6: Fix info
dock links    * FIX : Problem with "center" & "center & zoom" from the
properties dock    * FIX : API 0.6: Error when deleting a road with no nodes
(fixes #1732)    * FIX : API 0.6: Do not add "created_by" to changed features
(fixes #1728)    * FIX : API 0.6: Allow to define a comment on a changeset
(fixes #1731)    * FIX : API 0.6 fixes    * FIX : Nodes fetched by relations are
incomplete and not completed by "download more" (fixes #1715)
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 Sven Lankes <sven at lank.es> - 0.13.2-2
- disable use of qgtkstyle until gdal conflict (bz# 498111) is solved
* Sun Apr 26 2009 Sven Lankes <sven at lank.es> - 0.13.2-1
- new upstream release
* Sat Apr  4 2009 Sven Lankes <sven at lank.es> - 0.13.1-1
- new upstream release
* Wed Oct 15 2008 Sven Lankes <sven at lank.es> - 0.12-2
- remove additional source merkaartor.xpm - now included
- minor update of .desktop-file
--------------------------------------------------------------------------------


================================================================================
 php-ezc-Cache-1.4-1.fc9 (FEDORA-2009-4160)
 Provides a collection of lightweight classes to cache different kinds of data
--------------------------------------------------------------------------------
Update Information:

A solution for caching, supporting multiple backends allowing you to specify the
best performing solution for your caching-problem.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #497735 - Review Request: php-ezc-Cache - eZ Components Cache
        https://bugzilla.redhat.com/show_bug.cgi?id=497735
--------------------------------------------------------------------------------


================================================================================
 php-ezc-Mail-1.6.1-3.fc9 (FEDORA-2009-4089)
 Construct and/or parse Mail messages conforming to the mail standard
--------------------------------------------------------------------------------
Update Information:

The component allows you construct and/or parse Mail messages conforming to the
mail standard. It has support for attachments, multipart messages and HTML mail.
It also interfaces with SMTP to send mail or IMAP, POP3 or mbox to retrieve
e-mail.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #497736 - Review Request: php-ezc-Mail - eZ Components Mail
        https://bugzilla.redhat.com/show_bug.cgi?id=497736
--------------------------------------------------------------------------------


================================================================================
 php-ezc-PersistentObject-1.5.1-1.fc9 (FEDORA-2009-4117)
 Allows you to store an arbitrary data structures to a fixed database table
--------------------------------------------------------------------------------
Update Information:

This component allows you to store an arbitrary data structures to a fixed
database table. The component provides all the functionality needed to fetch,
list, delete etc these datastructures.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #490592 - Review Request: php-ezc-PersistentObject - eZ Components PersistentObject
        https://bugzilla.redhat.com/show_bug.cgi?id=490592
--------------------------------------------------------------------------------


================================================================================
 php-ezc-SystemInformation-1.0.7-1.fc9 (FEDORA-2009-4181)
 Provides access to common system variables
--------------------------------------------------------------------------------
Update Information:

Provides access to common system variables, such as CPU type and speed, and the
available amount of memory.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #490851 - Review Request: php-ezc-SystemInformation - eZ Components SystemInformation
        https://bugzilla.redhat.com/show_bug.cgi?id=490851
--------------------------------------------------------------------------------


================================================================================
 php-ezc-Template-1.3.2-1.fc9 (FEDORA-2009-4178)
 A fully functional Templating system
--------------------------------------------------------------------------------
Update Information:

A fully functional Templating system, supporting template compilation in
different levels, user defined functions and operators, an optimizer, output
escaping for different output handlers to prevent XSS and other security
problems and a plug in system for extra functionality (such as a Translation
system).
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #490591 - Review Request: php-ezc-Template - eZ Components Template
        https://bugzilla.redhat.com/show_bug.cgi?id=490591
--------------------------------------------------------------------------------


================================================================================
 powwow-1.2.15-1.fc9 (FEDORA-2009-4157)
 A console MUD client
--------------------------------------------------------------------------------
Update Information:

Powwow is a powerful console MUD client that supports triggers, aliases,
multiple connections, and more. It is primarily designed for DikuMUDs, but
nothing prevents its use for other types of MUDs. This client is also
extensible through a plugin interface.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #491566 - Review Request: powwow - A console MUD client
        https://bugzilla.redhat.com/show_bug.cgi?id=491566
--------------------------------------------------------------------------------


================================================================================
 samba-3.2.11-0.29.fc9 (FEDORA-2009-4101)
 The Samba Suite of programs
--------------------------------------------------------------------------------
ChangeLog:

* Tue Apr 28 2009 Guenther Deschner <gdeschner at redhat.com> - 3.2.11-0.29
- Fix "force user"
- resolves: #497708
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #497708 - "force user" no longer works since 3.2.11-0.30.fc10
        https://bugzilla.redhat.com/show_bug.cgi?id=497708
--------------------------------------------------------------------------------


================================================================================
 slapi-nis-0.13-1.fc9 (FEDORA-2009-4169)
 NIS Server and Schema Compatibility plugins for Directory Server
--------------------------------------------------------------------------------
Update Information:

This update expands the functionality of the module by adding the ability to
recursively follow references through the directory, and corrects module bugs
which could lead to server crashes.
--------------------------------------------------------------------------------
ChangeLog:

* Thu Apr 30 2009 Nalin Dahyabhai <nalin at redhat.com> - 0.13-1
- update to 0.13, reworking %link() to correct some bugs (#498432)
* Thu Apr 30 2009 Nalin Dahyabhai <nalin at redhat.com> - 0.12-1
- correct test suite failures that 0.11 started triggering
* Tue Apr 28 2009 Nalin Dahyabhai <nalin at redhat.com> - 0.11-1
- update to 0.11 (#497904)
* Wed Mar  4 2009 Nalin Dahyabhai <nalin at redhat.com> - 0.10-1
- update to 0.10
* Wed Feb 25 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.9-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #497904 - Crash on first ypcat
        https://bugzilla.redhat.com/show_bug.cgi?id=497904
  [ 2 ] Bug #498432 - deref_r can cause ns-slapd to crash
        https://bugzilla.redhat.com/show_bug.cgi?id=498432
--------------------------------------------------------------------------------


================================================================================
 squeak-image-3.10.2.7179-1.fc9 (FEDORA-2009-4193)
 The image files for Squeak
--------------------------------------------------------------------------------


================================================================================
 squeak-vm-3.10.4-3.fc9 (FEDORA-2009-4144)
 The Squeak virtual machine
--------------------------------------------------------------------------------


================================================================================
 testdisk-6.11-2.fc9 (FEDORA-2009-4204)
 Tool to check and undelete partition, PhotoRec recovers lost files
--------------------------------------------------------------------------------
Update Information:

TestDisk 6.11 can undelete files from NTFS partition and recover deleted exFAT.
Over 50 file types have been added to PhotoRec.  TestDisk & PhotoRec 6.11 are
faster than previous versions.  Read
http://www.cgsecurity.org/wiki/TestDisk_6.11_Release for more information
--------------------------------------------------------------------------------
ChangeLog:

* Fri Apr 24 2009 Christophe Grenier <grenier at cgsecurity.org> 6.11-2
- Add upstream patch that add missing bound checks when parsing EXIF information
* Sun Apr 19 2009 Christophe Grenier <grenier at cgsecurity.org> 6.11-1
- Update to latest version
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #494351 - RFE: Please add PhotoRec to the Summary and %description
        https://bugzilla.redhat.com/show_bug.cgi?id=494351
--------------------------------------------------------------------------------

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